Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | LPB072_RS18690 | Not Available | Positive | 4041895 - 4042416 | 19366.4 |
| duf2282 domain-containing protein | LPB072_RS24215 | Not Available | Positive | 4042534 - 4042893 | 12859.7 |
| duf692 domain-containing protein | LPB072_RS18700 | Not Available | Positive | 4042900 - 4043787 | 31688.9 |
| dna-binding domain-containing protein | LPB072_RS18705 | Not Available | Positive | 4043784 - 4044626 | 30169.5 |
| doxx family protein | LPB072_RS18710 | Not Available | Positive | 4044658 - 4045134 | 17149.4 |
| abc transporter substrate-binding protein | LPB072_RS18715 | Not Available | Positive | 4045157 - 4046377 | 44494.0 |
| abc transporter permease | LPB072_RS18720 | Not Available | Positive | 4046499 - 4048121 | 58394.0 |
| atp-binding cassette domain-containing protein | LPB072_RS18725 | Not Available | Positive | 4048118 - 4048765 | 23001.8 |
| cdp-alcohol phosphatidyltransferase family protein | LPB072_RS18730 | Not Available | Positive | 4048758 - 4049363 | 21279.3 |
| mate family efflux transporter | LPB072_RS18735 | Not Available | Negative | 4049447 - 4050796 | 48079.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
