Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | LPB072_RS18640 | Not Available | Positive | 4033610 - 4034242 | 23425.6 |
| aminoacyl-trna hydrolase | LPB072_RS18645 | Not Available | Positive | 4034357 - 4035019 | 24186.1 |
| yfhl family 4fe-4s dicluster ferredoxin | LPB072_RS18650 | Not Available | Negative | 4034980 - 4035270 | 10518.4 |
| pantetheine-phosphate adenylyltransferase | LPB072_RS18655 | Not Available | Negative | 4035284 - 4035802 | 18659.8 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | LPB072_RS18660 | Not Available | Negative | 4035836 - 4036447 | 21670.2 |
| m16 family metallopeptidase | LPB072_RS18665 | Not Available | Negative | 4036487 - 4037818 | 47919.2 |
| m16 family metallopeptidase | LPB072_RS18670 | Not Available | Negative | 4037839 - 4039239 | 51282.4 |
| signal recognition particle-docking protein ftsy | LPB072_RS18675 | Not Available | Positive | 4039523 - 4040803 | 44255.4 |
| zf-hc2 domain-containing protein | LPB072_RS18680 | Not Available | Negative | 4041020 - 4041223 | 7916.91 |
| sigma-70 family rna polymerase sigma factor | LPB072_RS18685 | Not Available | Negative | 4041235 - 4041810 | 22115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
