Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | LPB072_RS01790 | Not Available | Positive | 377252 - 378178 | 33898.3 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | LPB072_RS01795 | Not Available | Positive | 378193 - 378642 | 16005.1 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | LPB072_RS01800 | Not Available | Positive | 378647 - 379474 | 30046.2 |
| aldolase/citrate lyase family protein | LPB072_RS01805 | Not Available | Positive | 379488 - 380306 | 28447.1 |
| 2-dehydropantoate 2-reductase | LPB072_RS01810 | Not Available | Positive | 380369 - 381367 | 34139.4 |
| helix-turn-helix transcriptional regulator | LPB072_RS24040 | Not Available | Positive | 381422 - 382240 | 30081.2 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | LPB072_RS01820 | Not Available | Positive | 382358 - 383452 | 41122.6 |
| trap transporter substrate-binding protein | LPB072_RS01825 | Not Available | Positive | 383490 - 384503 | 36676.7 |
| marc family protein | LPB072_RS01830 | Not Available | Negative | 384535 - 385158 | 21657.3 |
| maoc family dehydratase | LPB072_RS01835 | Not Available | Negative | 385230 - 385751 | 19224.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
