Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fe-s cluster assembly protein suft | LPB072_RS17850 | Not Available | Positive | 3879545 - 3880090 | 19503.1 |
| phosphoglycerate dehydrogenase | LPB072_RS17855 | Not Available | Positive | 3880176 - 3881393 | 43011.0 |
| yggs family pyridoxal phosphate-dependent enzyme | LPB072_RS17860 | Not Available | Negative | 3881416 - 3882234 | 30052.9 |
| cytochrome p450 | LPB072_RS17865 | Not Available | Positive | 3882543 - 3883697 | 42511.8 |
| pas domain-containing protein | LPB072_RS17870 | Not Available | Negative | 3883763 - 3884194 | 15411.3 |
| metallophosphoesterase | LPB072_RS17875 | Not Available | Negative | 3884223 - 3884990 | 28427.9 |
| ferredoxin fdxa | LPB072_RS17880 | Not Available | Negative | 3885082 - 3885405 | 12086.3 |
| duf2249 domain-containing protein | LPB072_RS17885 | Not Available | Negative | 3885421 - 3885717 | 10627.7 |
| nnrs family protein | LPB072_RS17890 | Not Available | Negative | 3885777 - 3886994 | 42900.6 |
| rrf2 family transcriptional regulator | LPB072_RS17895 | Not Available | Positive | 3887118 - 3887633 | 18491.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
