Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | LPB072_RS01740 | Not Available | Negative | 365812 - 366834 | 38216.9 |
| glycosyltransferase family 2 protein | LPB072_RS01745 | Not Available | Negative | 366815 - 367747 | 34985.7 |
| arnt family glycosyltransferase | LPB072_RS01750 | Not Available | Negative | 367753 - 369435 | 61632.5 |
| dna repair protein rada | LPB072_RS01755 | Not Available | Negative | 369713 - 371089 | 48297.4 |
| hypothetical protein | LPB072_RS01760 | Not Available | Positive | 371147 - 372262 | 40952.4 |
| nad(p)h-dependent flavin oxidoreductase | LPB072_RS01765 | Not Available | Negative | 372453 - 373514 | 36363.5 |
| homoprotocatechuate degradation operon regulator hpar | LPB072_RS01770 | Not Available | Positive | 373608 - 374087 | 17877.5 |
| fumarylacetoacetate hydrolase family protein | LPB072_RS01775 | Not Available | Positive | 374084 - 374767 | 23798.9 |
| fumarylacetoacetate hydrolase family protein | LPB072_RS01780 | Not Available | Positive | 374764 - 375558 | 28978.7 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | LPB072_RS01785 | Not Available | Positive | 375633 - 377105 | 52765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
