Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS17700 | Not Available | Positive | 3852467 - 3852796 | 12080.6 |
| hypothetical protein | LPB072_RS17705 | Not Available | Positive | 3853244 - 3853576 | 12587.2 |
| n(5)-(carboxyethyl)ornithine synthase | LPB072_RS17710 | Not Available | Negative | 3853653 - 3854816 | 42801.7 |
| m14 family metallocarboxypeptidase | LPB072_RS17715 | Not Available | Negative | 3855142 - 3856074 | 33723.8 |
| duf3014 domain-containing protein | LPB072_RS17720 | Not Available | Negative | 3856071 - 3856949 | 31854.2 |
| restriction endonuclease | LPB072_RS17725 | Not Available | Positive | 3857152 - 3858135 | 35465.7 |
| gfo/idh/moca family protein | LPB072_RS17730 | Not Available | Positive | 3858187 - 3859386 | 41961.9 |
| srpbcc family protein | LPB072_RS17735 | Not Available | Positive | 3859505 - 3859945 | 16140.5 |
| pp_03530 | LPB072_RS17740 | Not Available | Negative | 3859959 - 3860720 | Not Available |
| dopa 4,5-dioxygenase family protein | LPB072_RS17745 | Not Available | Positive | 3860796 - 3861161 | 13537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
