Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | LPB072_RS17595 | Not Available | Positive | 3831762 - 3832346 | 20913.7 |
| nuclear transport factor 2 family protein | LPB072_RS17600 | Not Available | Negative | 3832369 - 3832740 | 13796.3 |
| n,n-dimethylformamidase beta subunit family domain-containing protein | LPB072_RS17610 | Not Available | Positive | 3832975 - 3834828 | 67380.6 |
| helix-turn-helix domain-containing protein | LPB072_RS23250 | Not Available | Positive | 3835131 - 3836414 | 47700.1 |
| hypothetical protein | LPB072_RS23540 | Not Available | Positive | 3836464 - 3836739 | 10046.0 |
| hypothetical protein | LPB072_RS17620 | Not Available | Positive | 3836801 - 3837229 | 15266.3 |
| hypothetical protein | LPB072_RS17625 | Not Available | Negative | 3837585 - 3837884 | 10656.5 |
| yhs domain-containing (seleno)protein | LPB072_RS17630 | Not Available | Positive | 3838129 - 3838602 | 17102.9 |
| ycjf family protein | LPB072_RS17635 | Not Available | Positive | 3838835 - 3839821 | 34245.1 |
| chemotaxis protein | LPB072_RS17640 | Not Available | Negative | 3839935 - 3840891 | 34435.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
