Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS17500 | Not Available | Negative | 3812406 - 3812600 | 7211.01 |
| excalibur calcium-binding domain-containing protein | LPB072_RS17505 | Not Available | Negative | 3812911 - 3813543 | 23330.5 |
| dead/deah box helicase | LPB072_RS17510 | Not Available | Negative | 3813607 - 3815427 | 67706.7 |
| cap domain-containing protein | LPB072_RS23245 | Not Available | Positive | 3815939 - 3816517 | 19721.2 |
| hypothetical protein | LPB072_RS17515 | Not Available | Positive | 3816715 - 3817260 | 19896.1 |
| 3-oxoadipate enol-lactonase | LPB072_RS17520 | Not Available | Positive | 3817370 - 3818152 | 28574.5 |
| hypothetical protein | LPB072_RS17525 | Not Available | Positive | 3818363 - 3818593 | 7973.05 |
| hypothetical protein | LPB072_RS17530 | Not Available | Negative | 3818987 - 3819217 | 8156.45 |
| crp/fnr family transcriptional regulator | LPB072_RS17535 | Not Available | Positive | 3819520 - 3820131 | 22740.3 |
| barstar family protein | LPB072_RS23955 | Not Available | Positive | 3820231 - 3820616 | 13415.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
