Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | LPB072_RS17405 | Not Available | Positive | 3794204 - 3796132 | 71988.8 |
| mfs transporter | LPB072_RS17410 | Not Available | Negative | 3796270 - 3797610 | 46580.6 |
| undecaprenyl-diphosphate phosphatase | LPB072_RS17415 | Not Available | Negative | 3797610 - 3798434 | 29547.9 |
| duf1439 domain-containing protein | LPB072_RS17420 | Not Available | Negative | 3798648 - 3799214 | 21083.6 |
| duf2306 domain-containing protein | LPB072_RS17425 | Not Available | Positive | 3799412 - 3799843 | 16106.1 |
| 2tm domain-containing protein | LPB072_RS17430 | Not Available | Positive | 3799875 - 3800183 | 11361.8 |
| duf6622 family protein | LPB072_RS17435 | Not Available | Positive | 3800190 - 3800705 | 18130.8 |
| alpha/beta hydrolase | LPB072_RS17440 | Not Available | Positive | 3800730 - 3801695 | 34573.2 |
| sensor histidine kinase | LPB072_RS17445 | Not Available | Positive | 3801718 - 3802839 | 41448.2 |
| lytr/algr family response regulator transcription factor | LPB072_RS17450 | Not Available | Positive | 3802854 - 3803693 | 30370.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
