Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | LPB072_RS01695 | Not Available | Negative | 355603 - 356454 | 31667.5 |
| carbohydrate abc transporter permease | LPB072_RS01700 | Not Available | Negative | 356455 - 357363 | 34128.2 |
| abc transporter substrate-binding protein | LPB072_RS01705 | Not Available | Negative | 357419 - 358651 | 45474.3 |
| beta-galactosidase | LPB072_RS01710 | Not Available | Negative | 358708 - 360696 | 74228.6 |
| abc transporter atp-binding protein | LPB072_RS01715 | Not Available | Negative | 360726 - 361877 | 41237.9 |
| laci family dna-binding transcriptional regulator | LPB072_RS01720 | Not Available | Negative | 362082 - 363149 | 37858.3 |
| class i sam-dependent methyltransferase | LPB072_RS01725 | Not Available | Negative | 363563 - 364321 | 28131.8 |
| gtra family protein | LPB072_RS01730 | Not Available | Negative | 364325 - 364711 | 14011.3 |
| degt/dnrj/eryc1/strs family aminotransferase | LPB072_RS01735 | Not Available | Negative | 364713 - 365615 | 32287.4 |
| degt/dnrj/eryc1/strs family aminotransferase | LPB072_RS23635 | Not Available | Negative | 365612 - 365815 | 7502.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
