Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | LPB072_RS17305 | Not Available | Positive | 3771719 - 3772843 | 42447.2 |
| nad(p)/fad-dependent oxidoreductase | LPB072_RS17310 | Not Available | Positive | 3772843 - 3774048 | 43709.2 |
| arsr/smtb family transcription factor | LPB072_RS17315 | Not Available | Negative | 3774049 - 3774762 | 25568.2 |
| nipsnap family protein | LPB072_RS17320 | Not Available | Positive | 3774871 - 3775245 | 14337.8 |
| 30s ribosomal protein s21 | LPB072_RS17325 | Not Available | Positive | 3775523 - 3775735 | 8501.61 |
| lysr family transcriptional regulator | LPB072_RS17330 | Not Available | Negative | 3775790 - 3776710 | 33044.3 |
| diaminopimelate decarboxylase | LPB072_RS17335 | Not Available | Positive | 3776780 - 3778018 | 44419.8 |
| dmt family transporter | LPB072_RS17340 | Not Available | Positive | 3778043 - 3778936 | 31283.4 |
| gatb/yqey domain-containing protein | LPB072_RS17345 | Not Available | Negative | 3778944 - 3779390 | 15740.4 |
| metalloprotease pmba | LPB072_RS17350 | Not Available | Negative | 3779508 - 3780935 | 50678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
