Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | LPB072_RS17205 | Not Available | Negative | 3747483 - 3748052 | 20315.1 |
| cytochrome d1 domain-containing protein | LPB072_RS17210 | Not Available | Negative | 3748320 - 3749855 | 55867.4 |
| heme d1 biosynthesis radical sam protein nirj | LPB072_RS17215 | Not Available | Negative | 3749941 - 3751272 | 49129.4 |
| asnc family transcriptional regulator | LPB072_RS17220 | Not Available | Negative | 3751275 - 3751757 | 17964.9 |
| lrp/asnc family transcriptional regulator | LPB072_RS17225 | Not Available | Negative | 3751747 - 3752244 | 18154.8 |
| lrp/asnc family transcriptional regulator | LPB072_RS17230 | Not Available | Negative | 3752231 - 3753265 | 37817.3 |
| cytochrome d1 domain-containing protein | LPB072_RS17235 | Not Available | Negative | 3753270 - 3754466 | 42800.7 |
| c-type cytochrome | LPB072_RS17240 | Not Available | Negative | 3754463 - 3754789 | 11497.9 |
| c-type cytochrome | LPB072_RS17245 | Not Available | Negative | 3754837 - 3755151 | 10725.2 |
| cytochrome d1 domain-containing protein | LPB072_RS17250 | Not Available | Negative | 3755287 - 3756966 | 61465.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
