Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | LPB072_RS17005 | Not Available | Negative | 3703545 - 3704519 | 35193.2 |
| abc transporter permease subunit | LPB072_RS17010 | Not Available | Negative | 3704667 - 3705527 | 30772.6 |
| abc transporter permease | LPB072_RS17015 | Not Available | Negative | 3705527 - 3706552 | 37510.1 |
| abc transporter substrate-binding protein | LPB072_RS17020 | Not Available | Negative | 3706657 - 3708249 | 58840.1 |
| murr/rpir family transcriptional regulator | LPB072_RS17025 | Not Available | Positive | 3708610 - 3709497 | 33190.6 |
| dipeptidase | LPB072_RS17030 | Not Available | Positive | 3709516 - 3710484 | 34585.4 |
| nad-glutamate dehydrogenase | LPB072_RS17035 | Not Available | Negative | 3710501 - 3715147 | 169836.0 |
| duf1178 family protein | LPB072_RS17040 | Not Available | Negative | 3715378 - 3715884 | 18191.6 |
| nudix domain-containing protein | LPB072_RS17045 | Not Available | Negative | 3715881 - 3716483 | 22336.6 |
| duf2818 family protein | LPB072_RS17050 | Not Available | Negative | 3716493 - 3716795 | 11125.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
