Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjgn family protein | LPB072_RS16955 | Not Available | Negative | 3694236 - 3695495 | 46208.6 |
| peptide-methionine (s)-s-oxide reductase msra | LPB072_RS16960 | Not Available | Negative | 3695594 - 3696187 | 21964.6 |
| peptide-methionine (r)-s-oxide reductase msrb | LPB072_RS16965 | Not Available | Negative | 3696209 - 3696706 | 17752.3 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS16970 | Not Available | Positive | 3696909 - 3697370 | 16528.2 |
| sdr family oxidoreductase | LPB072_RS16975 | Not Available | Positive | 3697402 - 3698151 | 26961.0 |
| 2-hydroxychromene-2-carboxylate isomerase | LPB072_RS16980 | Not Available | Positive | 3698171 - 3698764 | 21794.3 |
| abc transporter transmembrane domain-containing protein | LPB072_RS16985 | Not Available | Positive | 3698814 - 3700601 | 64188.0 |
| peroxiredoxin-like family protein | LPB072_RS16990 | Not Available | Negative | 3701118 - 3701666 | 20002.0 |
| arac family transcriptional regulator | LPB072_RS16995 | Not Available | Positive | 3701752 - 3702585 | 29689.9 |
| dipeptide abc transporter atp-binding protein | LPB072_RS17000 | Not Available | Negative | 3702586 - 3703548 | 35486.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
