Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxylase | LPB072_RS16905 | Not Available | Positive | 3682657 - 3685491 | 105280.0 |
| php domain-containing protein | LPB072_RS16910 | Not Available | Positive | 3685608 - 3686393 | 28038.1 |
| dmt family transporter | LPB072_RS16915 | Not Available | Positive | 3686393 - 3687316 | 33206.8 |
| l-threonylcarbamoyladenylate synthase | LPB072_RS16920 | Not Available | Positive | 3687379 - 3688014 | 23161.0 |
| site-2 protease family protein | LPB072_RS16925 | Not Available | Positive | 3688135 - 3688803 | 24406.7 |
| tryptophan--trna ligase | LPB072_RS16930 | Not Available | Positive | 3688820 - 3690118 | 47315.5 |
| luxr c-terminal-related transcriptional regulator | LPB072_RS16935 | Not Available | Positive | 3690388 - 3690981 | 21984.6 |
| sensor histidine kinase | LPB072_RS16940 | Not Available | Negative | 3691037 - 3692485 | 53361.6 |
| Trna-ser | Not Available | Not Available | Positive | 3692808 - 3692895 | Not Available |
| m48 family metallopeptidase | LPB072_RS16950 | Not Available | Negative | 3693103 - 3694236 | 40505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
