Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s49 family peptidase | LPB072_RS16855 | Not Available | Negative | 3670631 - 3671602 | 34798.9 |
| rieske (2fe-2s) protein | LPB072_RS16860 | Not Available | Negative | 3671615 - 3672013 | 14353.2 |
| had family hydrolase | LPB072_RS16865 | Not Available | Negative | 3672006 - 3672665 | 23968.6 |
| h-ns family nucleoid-associated regulatory protein | LPB072_RS16870 | Not Available | Negative | 3672781 - 3673137 | 12734.4 |
| rlua family pseudouridine synthase | LPB072_RS16875 | Not Available | Negative | 3673165 - 3674199 | 38842.3 |
| rne/rng family ribonuclease | LPB072_RS16880 | Not Available | Positive | 3674854 - 3677835 | 108659.0 |
| heme biosynthesis protein hemy | LPB072_RS16885 | Not Available | Negative | 3678141 - 3679454 | 48577.7 |
| uroporphyrinogen-iii c-methyltransferase | LPB072_RS16890 | Not Available | Negative | 3679454 - 3680683 | 44032.3 |
| uroporphyrinogen-iii synthase | LPB072_RS16895 | Not Available | Negative | 3680670 - 3681542 | 31291.0 |
| hydroxymethylbilane synthase | LPB072_RS16900 | Not Available | Negative | 3681554 - 3682519 | 34505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
