Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i adenylate-forming enzyme family protein | LPB072_RS01645 | Not Available | Negative | 343815 - 345380 | 54493.1 |
| response regulator | LPB072_RS01650 | Not Available | Positive | 345467 - 346192 | 26694.5 |
| atp-binding protein | LPB072_RS01655 | Not Available | Positive | 346344 - 347618 | 46019.6 |
| zinc-finger domain-containing protein | LPB072_RS01660 | Not Available | Negative | 347924 - 348130 | 7415.82 |
| branched-chain amino acid transaminase | LPB072_RS01665 | Not Available | Negative | 348141 - 349082 | 34867.6 |
| aldose 1-epimerase | LPB072_RS01670 | Not Available | Positive | 349308 - 350159 | 31139.0 |
| galactokinase | LPB072_RS01675 | Not Available | Negative | 350167 - 351342 | 41750.0 |
| udp-glucose 4-epimerase gale | LPB072_RS01680 | Not Available | Negative | 351348 - 352403 | 37873.6 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | LPB072_RS01685 | Not Available | Negative | 352400 - 353452 | 39181.9 |
| alpha-galactosidase | LPB072_RS01690 | Not Available | Negative | 353449 - 355593 | 78290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
