Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | LPB072_RS16650 | Not Available | Positive | 3631006 - 3631710 | 26524.4 |
| succinate dehydrogenase assembly factor 2 | LPB072_RS16655 | Not Available | Positive | 3631730 - 3632032 | 11311.9 |
| citrate synthase | LPB072_RS16660 | Not Available | Positive | 3632043 - 3633344 | 48044.8 |
| lysr substrate-binding domain-containing protein | LPB072_RS16665 | Not Available | Positive | 3633507 - 3634454 | 34323.2 |
| 3-isopropylmalate dehydratase large subunit | LPB072_RS16670 | Not Available | Positive | 3634486 - 3635907 | 50729.7 |
| 3-isopropylmalate dehydratase small subunit | LPB072_RS16675 | Not Available | Positive | 3635925 - 3636569 | 24248.2 |
| antibiotic biosynthesis monooxygenase family protein | LPB072_RS23230 | Not Available | Positive | 3636600 - 3636950 | 13138.1 |
| 3-isopropylmalate dehydrogenase | LPB072_RS16685 | Not Available | Positive | 3637294 - 3638367 | 38520.6 |
| aspartate-semialdehyde dehydrogenase | LPB072_RS16690 | Not Available | Positive | 3638676 - 3639806 | 40323.2 |
| fimv/hubp family polar landmark protein | LPB072_RS16695 | Not Available | Positive | 3640109 - 3642676 | 88809.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
