Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arge/dape family deacylase | LPB072_RS16550 | Not Available | Positive | 3602964 - 3604217 | 44741.5 |
| nadp-dependent malic enzyme | LPB072_RS16555 | Not Available | Positive | 3604313 - 3606616 | 81969.7 |
| uracil-xanthine permease family protein | LPB072_RS16560 | Not Available | Positive | 3606840 - 3608189 | 46627.9 |
| response regulator | LPB072_RS16565 | Not Available | Positive | 3608471 - 3610156 | 62135.6 |
| fad-dependent monooxygenase | LPB072_RS16570 | Not Available | Negative | 3610196 - 3611419 | 43515.0 |
| vwa domain-containing protein | LPB072_RS16575 | Not Available | Negative | 3611471 - 3612523 | 37879.4 |
| duf58 domain-containing protein | LPB072_RS16580 | Not Available | Negative | 3612583 - 3613584 | 37002.5 |
| aaa family atpase | LPB072_RS16585 | Not Available | Negative | 3613595 - 3614560 | 35120.9 |
| s1c family serine protease | LPB072_RS16590 | Not Available | Negative | 3614720 - 3615631 | 31326.8 |
| aconitate hydratase | LPB072_RS16595 | Not Available | Negative | 3615692 - 3618532 | 101650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
