Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldolase | LPB072_RS16445 | Not Available | Positive | 3577289 - 3577957 | 24150.1 |
| glycerate kinase | LPB072_RS16450 | Not Available | Negative | 3578019 - 3579350 | 45972.1 |
| 8-oxoguanine deaminase | LPB072_RS16455 | Not Available | Positive | 3579463 - 3580959 | 53333.6 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS16460 | Not Available | Negative | 3580975 - 3581727 | 25914.0 |
| tonb-dependent receptor plug domain-containing protein | LPB072_RS16470 | Not Available | Positive | 3582209 - 3584260 | 75683.1 |
| yfir family protein | LPB072_RS16475 | Not Available | Positive | 3584262 - 3584810 | 19929.0 |
| response regulator | LPB072_RS16480 | Not Available | Positive | 3584807 - 3587104 | 83939.1 |
| response regulator | LPB072_RS16485 | Not Available | Positive | 3587101 - 3587487 | 14033.2 |
| response regulator | LPB072_RS16490 | Not Available | Positive | 3587480 - 3591553 | 149377.0 |
| alpha/beta hydrolase | LPB072_RS16495 | Not Available | Negative | 3591602 - 3592303 | 25205.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
