Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | LPB072_RS16395 | Not Available | Positive | 3565219 - 3568446 | 117455.0 |
| smp-30/gluconolactonase/lre family protein | LPB072_RS16400 | Not Available | Positive | 3569078 - 3570073 | 35358.8 |
| gntr family transcriptional regulator | LPB072_RS16405 | Not Available | Positive | 3570070 - 3570744 | 25335.4 |
| isocitrate/isopropylmalate dehydrogenase family protein | LPB072_RS16410 | Not Available | Positive | 3570756 - 3571829 | 38226.1 |
| gfo/idh/moca family protein | LPB072_RS16415 | Not Available | Positive | 3571826 - 3572872 | 38560.8 |
| trap transporter substrate-binding protein | LPB072_RS16420 | Not Available | Positive | 3572883 - 3573875 | 36651.8 |
| trap transporter small permease | LPB072_RS16425 | Not Available | Positive | 3573882 - 3574409 | 19445.1 |
| trap transporter large permease | LPB072_RS16430 | Not Available | Positive | 3574414 - 3575709 | 45858.2 |
| putative quinol monooxygenase | LPB072_RS16435 | Not Available | Positive | 3575755 - 3576045 | 10997.9 |
| 3-oxo-tetronate kinase | LPB072_RS16440 | Not Available | Positive | 3576042 - 3577292 | 43098.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
