Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | LPB072_RS16345 | Not Available | Negative | 3550870 - 3551577 | 25214.2 |
| duf802 domain-containing protein | LPB072_RS16350 | Not Available | Negative | 3551574 - 3554231 | 94000.2 |
| duf3348 family protein | LPB072_RS16355 | Not Available | Negative | 3554256 - 3554996 | 26365.3 |
| aldo/keto reductase | LPB072_RS16360 | Not Available | Positive | 3555709 - 3556740 | 37153.0 |
| duf3800 domain-containing protein | LPB072_RS16365 | Not Available | Negative | 3557177 - 3558307 | 42507.0 |
| hnh endonuclease | LPB072_RS16370 | Not Available | Negative | 3558322 - 3559407 | 41543.5 |
| aaa family atpase | LPB072_RS16375 | Not Available | Negative | 3559652 - 3561820 | 80868.5 |
| duf6998 domain-containing protein | LPB072_RS16380 | Not Available | Positive | 3562172 - 3562741 | 21295.8 |
| grea/greb family elongation factor | LPB072_RS16385 | Not Available | Negative | 3563082 - 3563564 | 17603.1 |
| lysr family transcriptional regulator | LPB072_RS16390 | Not Available | Negative | 3564185 - 3565102 | 32629.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
