Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate dehydrogenase | LPB072_RS01585 | Not Available | Negative | 328052 - 330682 | 95781.3 |
| lrp/asnc family transcriptional regulator | LPB072_RS01590 | Not Available | Positive | 330786 - 331265 | 17568.5 |
| methionine gamma-lyase | LPB072_RS01595 | Not Available | Negative | 331207 - 332496 | 45134.1 |
| lrp/asnc family transcriptional regulator | LPB072_RS01600 | Not Available | Positive | 332643 - 333110 | 17357.9 |
| mbl fold metallo-hydrolase | LPB072_RS01605 | Not Available | Positive | 333190 - 333828 | 23368.9 |
| response regulator transcription factor | LPB072_RS01610 | Not Available | Negative | 333856 - 334542 | 24787.0 |
| sensor histidine kinase | LPB072_RS01615 | Not Available | Positive | 334694 - 336538 | 68939.1 |
| hypothetical protein | LPB072_RS01625 | Not Available | Positive | 338056 - 340383 | 81699.5 |
| acyltransferase family protein | LPB072_RS01635 | Not Available | Negative | 341009 - 342118 | 40620.6 |
| ampg family muropeptide mfs transporter | LPB072_RS01640 | Not Available | Positive | 342464 - 343852 | 49449.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
