Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide exchange factor grpe | LPB072_RS16245 | Not Available | Positive | 3533337 - 3533915 | 20616.2 |
| molecular chaperone dnak | LPB072_RS16250 | Not Available | Positive | 3534046 - 3535989 | 69007.0 |
| molecular chaperone dnaj | LPB072_RS16255 | Not Available | Positive | 3536095 - 3537228 | 41120.5 |
| hypothetical protein | LPB072_RS16260 | Not Available | Positive | 3537630 - 3537929 | 10691.7 |
| single-stranded dna-binding protein | LPB072_RS16265 | Not Available | Negative | 3538361 - 3538699 | 11999.5 |
| hypothetical protein | LPB072_RS16270 | Not Available | Negative | 3538733 - 3539209 | 17443.6 |
| glutathione s-transferase family protein | LPB072_RS16275 | Not Available | Positive | 3539357 - 3539968 | 22525.1 |
| lysr family transcriptional regulator | LPB072_RS16280 | Not Available | Negative | 3539988 - 3540923 | 33997.5 |
| homocysteine s-methyltransferase family protein | LPB072_RS16285 | Not Available | Negative | 3541240 - 3542154 | 33011.4 |
| transglutaminase family protein | LPB072_RS16290 | Not Available | Positive | 3542662 - 3543522 | 31121.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
