Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | LPB072_RS16190 | Not Available | Positive | 3523808 - 3524227 | 15831.3 |
| tannase/feruloyl esterase family alpha/beta hydrolase | LPB072_RS16195 | Not Available | Positive | 3524267 - 3525976 | 58830.9 |
| flavin reductase family protein | LPB072_RS16200 | Not Available | Positive | 3526012 - 3526695 | 25344.1 |
| acyl-coa dehydrogenase family protein | LPB072_RS16205 | Not Available | Positive | 3526803 - 3528479 | 61094.4 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS16210 | Not Available | Positive | 3528516 - 3529037 | 18482.6 |
| winged helix-turn-helix transcriptional regulator | LPB072_RS16215 | Not Available | Positive | 3529201 - 3529545 | 12525.9 |
| duf3592 domain-containing protein | LPB072_RS16220 | Not Available | Negative | 3529596 - 3530267 | 24614.6 |
| copd family protein | LPB072_RS16230 | Not Available | Negative | 3530927 - 3531361 | 15881.9 |
| duf3817 domain-containing protein | LPB072_RS16235 | Not Available | Negative | 3531358 - 3531696 | 11879.0 |
| glxa family transcriptional regulator | LPB072_RS16240 | Not Available | Positive | 3531827 - 3532870 | 37574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
