Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aec family transporter | LPB072_RS16140 | Not Available | Negative | 3512574 - 3513545 | 33851.6 |
| nad(p)-dependent oxidoreductase | LPB072_RS16145 | Not Available | Negative | 3513562 - 3514470 | 31796.1 |
| trap transporter large permease | LPB072_RS16150 | Not Available | Negative | 3514557 - 3515873 | 45900.0 |
| trap transporter small permease | LPB072_RS16155 | Not Available | Negative | 3515876 - 3516397 | 19237.2 |
| trap transporter substrate-binding protein | LPB072_RS16160 | Not Available | Negative | 3516615 - 3517655 | 37393.2 |
| amidohydrolase family protein | LPB072_RS16165 | Not Available | Negative | 3517839 - 3518708 | 32835.3 |
| crotonase/enoyl-coa hydratase family protein | LPB072_RS16170 | Not Available | Positive | 3518822 - 3519610 | 27698.5 |
| feruloyl-coa synthase | LPB072_RS16175 | Not Available | Positive | 3519742 - 3521595 | 67254.6 |
| thiolase family protein | LPB072_RS16180 | Not Available | Positive | 3521717 - 3522970 | 43382.4 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS16185 | Not Available | Positive | 3522994 - 3523758 | 26149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
