Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | LPB072_RS16090 | Not Available | Negative | 3504058 - 3504729 | 23199.9 |
| lysr substrate-binding domain-containing protein | LPB072_RS16095 | Not Available | Positive | 3504895 - 3505806 | 32315.8 |
| diaminobutyrate acetyltransferase | LPB072_RS16100 | Not Available | Positive | 3506160 - 3506732 | 20456.2 |
| diaminobutyrate--2-oxoglutarate transaminase | LPB072_RS16105 | Not Available | Positive | 3506779 - 3508047 | 46195.1 |
| ectoine synthase | LPB072_RS16110 | Not Available | Positive | 3508073 - 3508462 | 14125.7 |
| ectoine hydroxylase | LPB072_RS16115 | Not Available | Positive | 3508480 - 3509418 | 34805.1 |
| ectoine/hydroxyectoine abc transporter substrate-binding protein ehub | LPB072_RS16120 | Not Available | Positive | 3509457 - 3510314 | 30318.2 |
| ectoine/hydroxyectoine abc transporter permease subunit ehuc | LPB072_RS16125 | Not Available | Positive | 3510408 - 3511061 | 23489.5 |
| ectoine/hydroxyectoine abc transporter permease subunit ehud | LPB072_RS16130 | Not Available | Positive | 3511061 - 3511738 | 24741.2 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | LPB072_RS16135 | Not Available | Positive | 3511735 - 3512535 | 29141.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
