Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | LPB072_RS16040 | Not Available | Positive | 3492680 - 3493309 | 23208.9 |
| aldo/keto reductase | LPB072_RS16045 | Not Available | Negative | 3493317 - 3494324 | 35953.1 |
| efflux rnd transporter permease subunit | LPB072_RS16050 | Not Available | Negative | 3494327 - 3497437 | 109937.0 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS16055 | Not Available | Negative | 3497434 - 3498681 | 41632.6 |
| gfo/idh/moca family oxidoreductase | LPB072_RS16060 | Not Available | Negative | 3498982 - 3499938 | 34673.4 |
| class iii extradiol dioxygenase subunit beta | LPB072_RS16065 | Not Available | Negative | 3499940 - 3500818 | 32085.5 |
| protocatechuate 4,5-dioxygenase subunit alpha | LPB072_RS16070 | Not Available | Negative | 3500821 - 3501261 | 16462.5 |
| amidohydrolase family protein | LPB072_RS16075 | Not Available | Negative | 3501261 - 3502196 | 34952.7 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | LPB072_RS16080 | Not Available | Negative | 3502315 - 3502998 | 24097.6 |
| amidohydrolase family protein | LPB072_RS16085 | Not Available | Negative | 3503001 - 3504035 | 38598.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
