Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 4,5-dioxygenase subunit alpha | LPB072_RS15990 | Not Available | Negative | 3483356 - 3483703 | 12457.8 |
| lysr family transcriptional regulator | LPB072_RS15995 | Not Available | Positive | 3483787 - 3484707 | 33592.7 |
| acyl-coa synthetase | LPB072_RS16000 | Not Available | Positive | 3484790 - 3486544 | 61280.6 |
| arsenical pump-driving atpase | LPB072_RS16005 | Not Available | Negative | 3486575 - 3488374 | 62836.4 |
| sensor histidine kinase | LPB072_RS16010 | Not Available | Negative | 3488420 - 3489817 | 50731.5 |
| response regulator transcription factor | LPB072_RS16015 | Not Available | Negative | 3489826 - 3490539 | 26489.1 |
| hypothetical protein | LPB072_RS16020 | Not Available | Negative | 3490549 - 3490857 | 11376.9 |
| spy/cpxp family protein refolding chaperone | LPB072_RS16025 | Not Available | Negative | 3490872 - 3491342 | 16935.1 |
| darcynin family protein | LPB072_RS16030 | Not Available | Negative | 3491489 - 3491842 | 13237.9 |
| sdr family oxidoreductase | LPB072_RS16035 | Not Available | Negative | 3491882 - 3492652 | 27363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
