Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LPB072_RS01535 | Not Available | Positive | 314094 - 315329 | 43419.2 |
| duf3833 domain-containing protein | LPB072_RS01540 | Not Available | Positive | 315326 - 315862 | 20170.9 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS01545 | Not Available | Positive | 315870 - 316625 | 26494.4 |
| nuclear transport factor 2 family protein | LPB072_RS01550 | Not Available | Positive | 316627 - 317049 | 16128.5 |
| cation:proton antiporter | LPB072_RS01555 | Not Available | Positive | 317315 - 318922 | 56428.6 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | LPB072_RS01560 | Not Available | Negative | 318946 - 319422 | 17697.1 |
| heavy metal translocating p-type atpase | LPB072_RS01565 | Not Available | Positive | 319477 - 321753 | 79301.8 |
| response regulator | LPB072_RS01570 | Not Available | Negative | 321771 - 322163 | 14296.3 |
| transporter substrate-binding domain-containing protein | LPB072_RS01575 | Not Available | Negative | 322160 - 325432 | 118233.0 |
| response regulator | LPB072_RS01580 | Not Available | Negative | 325449 - 327878 | 88943.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
