Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS23515 | Not Available | Positive | 3377497 - 3377664 | 6076.19 |
| helix-turn-helix domain-containing protein | LPB072_RS23220 | Not Available | Positive | 3377661 - 3377969 | 11620.0 |
| tyrosine-type recombinase/integrase | LPB072_RS15495 | Not Available | Negative | 3377896 - 3379122 | 46419.1 |
| ompa family protein | LPB072_RS15500 | Not Available | Negative | 3379438 - 3380121 | 21936.6 |
| gamma-glutamylcyclotransferase | LPB072_RS15505 | Not Available | Positive | 3380212 - 3380856 | 24250.9 |
| pyridoxamine 5'-phosphate oxidase | LPB072_RS15510 | Not Available | Positive | 3380904 - 3381548 | 24400.8 |
| hypothetical protein | LPB072_RS23520 | Not Available | Positive | 3381822 - 3382394 | 20518.4 |
| duf1593 domain-containing protein | LPB072_RS15520 | Not Available | Negative | 3382754 - 3383782 | 38258.1 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | LPB072_RS15530 | Not Available | Negative | 3384117 - 3384602 | 17232.9 |
| polynucleotide adenylyltransferase pcnb | LPB072_RS15535 | Not Available | Negative | 3384624 - 3386285 | 61540.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
