Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer atpase trbb | LPB072_RS15445 | Not Available | Positive | 3367756 - 3368820 | 37364.4 |
| trbc/virb2 family protein | LPB072_RS15450 | Not Available | Positive | 3368817 - 3369233 | 14267.7 |
| virb3 family type iv secretion system protein | LPB072_RS15455 | Not Available | Positive | 3369230 - 3369511 | 9802.19 |
| conjugal transfer protein trbe | LPB072_RS15460 | Not Available | Positive | 3369522 - 3371969 | 89799.8 |
| p-type conjugative transfer protein trbj | LPB072_RS15465 | Not Available | Positive | 3371966 - 3372739 | 28120.6 |
| p-type conjugative transfer protein trbl | LPB072_RS15470 | Not Available | Positive | 3372758 - 3374125 | 44942.5 |
| conjugal transfer protein trbf | LPB072_RS15475 | Not Available | Positive | 3374138 - 3374842 | 26094.8 |
| p-type conjugative transfer protein trbg | LPB072_RS15480 | Not Available | Positive | 3374839 - 3375852 | 36667.0 |
| trbi/virb10 family protein | LPB072_RS15485 | Not Available | Positive | 3375855 - 3377174 | 46077.5 |
| duf2274 domain-containing protein | LPB072_RS15490 | Not Available | Positive | 3377171 - 3377452 | 10054.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
