Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4124 domain-containing protein | LPB072_RS01490 | Not Available | Negative | 304174 - 304821 | 24903.7 |
| orotate phosphoribosyltransferase | LPB072_RS01495 | Not Available | Negative | 304833 - 305549 | 25367.4 |
| exodeoxyribonuclease iii | LPB072_RS01500 | Not Available | Positive | 305560 - 306351 | 29608.9 |
| trap transporter permease | LPB072_RS01505 | Not Available | Positive | 306399 - 309029 | 92949.2 |
| merr family transcriptional regulator | LPB072_RS01510 | Not Available | Negative | 309096 - 310034 | 33896.0 |
| hypothetical protein | LPB072_RS23320 | Not Available | Positive | 310119 - 310268 | 5207.17 |
| nad(p)/fad-dependent oxidoreductase | LPB072_RS01515 | Not Available | Positive | 310281 - 311600 | 48641.9 |
| duf1365 domain-containing protein | LPB072_RS01520 | Not Available | Positive | 311593 - 312402 | 30237.8 |
| sam-dependent methyltransferase | LPB072_RS01525 | Not Available | Positive | 312399 - 313586 | 44394.6 |
| chalcone isomerase family protein | LPB072_RS01530 | Not Available | Positive | 313573 - 314088 | 18822.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
