Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiator protein a | LPB072_RS15300 | Not Available | Positive | 3336916 - 3337761 | 31647.1 |
| para family partition atpase | LPB072_RS15305 | Not Available | Positive | 3338006 - 3338644 | 22826.6 |
| chromosome partitioning protein parb | LPB072_RS15310 | Not Available | Positive | 3338641 - 3338913 | 9954.85 |
| duf2840 domain-containing protein | LPB072_RS15315 | Not Available | Positive | 3338910 - 3339491 | 21226.5 |
| s26 family signal peptidase | LPB072_RS15320 | Not Available | Positive | 3339488 - 3340039 | 19499.7 |
| relaxase/mobilization nuclease domain-containing protein | LPB072_RS15325 | Not Available | Positive | 3340311 - 3342269 | 72759.1 |
| hypothetical protein | LPB072_RS23945 | Not Available | Negative | 3342399 - 3342536 | 5014.11 |
| branched-chain amino acid abc transporter permease | LPB072_RS15330 | Not Available | Negative | 3342575 - 3343579 | 35271.5 |
| branched-chain amino acid abc transporter permease | LPB072_RS15335 | Not Available | Negative | 3343582 - 3344454 | 30333.2 |
| abc transporter atp-binding protein | LPB072_RS15340 | Not Available | Negative | 3344472 - 3345188 | 25944.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
