Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6988 family protein | LPB072_RS15250 | Not Available | Negative | 3328071 - 3328739 | 24081.3 |
| duf932 domain-containing protein | LPB072_RS15255 | Not Available | Positive | 3329277 - 3330104 | 30713.5 |
| parb n-terminal domain-containing protein | LPB072_RS15260 | Not Available | Positive | 3330201 - 3332210 | 72778.6 |
| hypothetical protein | LPB072_RS15265 | Not Available | Positive | 3332553 - 3333305 | 28034.2 |
| duf736 domain-containing protein | LPB072_RS15275 | Not Available | Positive | 3334038 - 3334349 | 11385.3 |
| helix-turn-helix domain-containing protein | LPB072_RS15280 | Not Available | Negative | 3334408 - 3334698 | 9996.0 |
| duf2958 domain-containing protein | LPB072_RS15285 | Not Available | Positive | 3335019 - 3335372 | 12805.3 |
| hypothetical protein | LPB072_RS23940 | Not Available | Positive | 3335421 - 3335567 | 5165.44 |
| duf2285 domain-containing protein | LPB072_RS15290 | Not Available | Positive | 3335666 - 3336487 | 30160.9 |
| helix-turn-helix domain-containing protein | LPB072_RS15295 | Not Available | Positive | 3336572 - 3336880 | 11474.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
