Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | LPB072_RS15200 | Not Available | Negative | 3314828 - 3316561 | 65122.6 |
| atp-dependent nuclease | LPB072_RS15205 | Not Available | Negative | 3316554 - 3318623 | 75773.6 |
| dead/deah box helicase | LPB072_RS15210 | Not Available | Negative | 3318727 - 3322203 | 127243.0 |
| hachiman antiphage defense system protein hama | LPB072_RS15215 | Not Available | Negative | 3322190 - 3322969 | 28855.2 |
| hypothetical protein | LPB072_RS15220 | Not Available | Negative | 3323044 - 3323829 | 28677.6 |
| marr family transcriptional regulator | LPB072_RS15225 | Not Available | Negative | 3323823 - 3324818 | 36904.5 |
| hypothetical protein | LPB072_RS15230 | Not Available | Positive | 3325006 - 3325719 | 25809.2 |
| radc family protein | LPB072_RS15235 | Not Available | Positive | 3326153 - 3326674 | 18959.9 |
| thioesterase family protein | LPB072_RS15240 | Not Available | Positive | 3326930 - 3327484 | 20257.1 |
| duf2958 domain-containing protein | LPB072_RS15245 | Not Available | Positive | 3327671 - 3328021 | 12791.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
