Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | LPB072_RS15150 | Not Available | Negative | 3301367 - 3302281 | 33903.3 |
| type iv toxin-antitoxin system abiei family antitoxin | LPB072_RS15155 | Not Available | Negative | 3302278 - 3303015 | 27336.2 |
| tigr02677 family protein | LPB072_RS15165 | Not Available | Positive | 3303444 - 3304901 | 54398.5 |
| tigr02678 family protein | LPB072_RS15170 | Not Available | Positive | 3304898 - 3306169 | 47923.9 |
| tigr02680 family protein | LPB072_RS15175 | Not Available | Positive | 3306166 - 3310335 | 154560.0 |
| tigr02679 family protein | LPB072_RS15180 | Not Available | Positive | 3310341 - 3311621 | 46326.5 |
| hypothetical protein | LPB072_RS23500 | Not Available | Positive | 3311735 - 3312307 | 20505.6 |
| hypothetical protein | LPB072_RS15190 | Not Available | Positive | 3312297 - 3312647 | 12933.5 |
| duf4417 domain-containing protein | LPB072_RS15195 | Not Available | Positive | 3312783 - 3313853 | 40252.5 |
| hypothetical protein | LPB072_RS23505 | Not Available | Negative | 3313782 - 3314567 | 27745.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
