Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | LPB072_RS14995 | Not Available | Positive | 3278031 - 3278594 | 19239.3 |
| hypothetical protein | LPB072_RS15000 | Not Available | Positive | 3278680 - 3278919 | 8513.25 |
| alkene reductase | LPB072_RS15005 | Not Available | Positive | 3279045 - 3280118 | 38392.7 |
| hypothetical protein | LPB072_RS15010 | Not Available | Positive | 3280200 - 3281195 | 37029.7 |
| sos response-associated peptidase | LPB072_RS15015 | Not Available | Negative | 3281286 - 3282041 | 27453.0 |
| m23 family metallopeptidase | LPB072_RS15020 | Not Available | Positive | 3282127 - 3283017 | 31913.4 |
| s1 family peptidase | LPB072_RS15025 | Not Available | Positive | 3283232 - 3284053 | 29806.2 |
| duf938 domain-containing protein | LPB072_RS15030 | Not Available | Positive | 3284065 - 3284694 | 22505.0 |
| sos response-associated peptidase family protein | LPB072_RS15035 | Not Available | Negative | 3284691 - 3285329 | 23542.0 |
| leucine-rich repeat-containing protein kinase family protein | LPB072_RS15040 | Not Available | Negative | 3285378 - 3286676 | 46096.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
