Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | LPB072_RS14895 | Not Available | Negative | 3257339 - 3258268 | 32273.7 |
| sugar abc transporter substrate-binding protein | LPB072_RS14900 | Not Available | Negative | 3258516 - 3259517 | 33712.9 |
| pfkb family carbohydrate kinase | LPB072_RS14905 | Not Available | Positive | 3259658 - 3260671 | 35168.4 |
| glucose-6-phosphate dehydrogenase | LPB072_RS14910 | Not Available | Positive | 3260798 - 3262273 | 54914.0 |
| 6-phosphogluconolactonase | LPB072_RS14915 | Not Available | Positive | 3262460 - 3263149 | 24105.2 |
| phosphogluconate dehydratase | LPB072_RS14920 | Not Available | Positive | 3263288 - 3265114 | 64105.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | LPB072_RS14925 | Not Available | Positive | 3265237 - 3265872 | 21965.0 |
| glucose-6-phosphate isomerase | LPB072_RS14930 | Not Available | Positive | 3266016 - 3267590 | 56343.0 |
| methylglyoxal synthase | LPB072_RS14935 | Not Available | Positive | 3267594 - 3267962 | 12861.7 |
| lysr family transcriptional regulator | LPB072_RS14940 | Not Available | Negative | 3267970 - 3268869 | 31989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
