Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator argp | LPB072_RS01440 | Not Available | Negative | 292710 - 293636 | 33508.5 |
| d-amino acid dehydrogenase | LPB072_RS01445 | Not Available | Positive | 293810 - 295099 | 46294.7 |
| sulfite exporter taue/safe family protein | LPB072_RS01450 | Not Available | Positive | 295239 - 295997 | 26990.5 |
| penicillin-binding protein 2 | LPB072_RS01455 | Not Available | Negative | 296037 - 298025 | 73538.5 |
| rod shape-determining protein mred | LPB072_RS01460 | Not Available | Negative | 298028 - 298558 | 19324.4 |
| rod shape-determining protein mrec | LPB072_RS01465 | Not Available | Negative | 298555 - 299484 | 33240.5 |
| rod shape-determining protein | LPB072_RS01470 | Not Available | Negative | 299537 - 300580 | 37058.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | LPB072_RS01475 | Not Available | Positive | 300854 - 301153 | 10843.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | LPB072_RS01480 | Not Available | Positive | 301150 - 302649 | 52439.2 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | LPB072_RS01485 | Not Available | Positive | 302652 - 304106 | 53086.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
