Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | LPB072_RS00110 | Not Available | Negative | 23390 - 23611 | 7709.36 |
| lamb/ycsf family protein | LPB072_RS00115 | Not Available | Negative | 23633 - 24409 | 26792.0 |
| biotin-dependent carboxyltransferase family protein | LPB072_RS00120 | Not Available | Negative | 24406 - 25371 | 34354.4 |
| 5-oxoprolinase subunit pxpb | LPB072_RS00125 | Not Available | Negative | 25368 - 26042 | 24195.3 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | LPB072_RS00130 | Not Available | Negative | 26084 - 27451 | 48535.3 |
| trap transporter large permease | LPB072_RS00135 | Not Available | Negative | 27454 - 28752 | 45150.2 |
| trap transporter small permease | LPB072_RS00140 | Not Available | Negative | 28786 - 29307 | 18296.6 |
| trap transporter substrate-binding protein | LPB072_RS00145 | Not Available | Negative | 29317 - 30282 | 34736.7 |
| had-ia family hydrolase | LPB072_RS00150 | Not Available | Positive | 30540 - 31202 | 22648.9 |
| duf3297 family protein | LPB072_RS00155 | Not Available | Positive | 31299 - 31562 | 9868.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
