Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhyh protein | LPB072_RS14730 | Not Available | Negative | 3222841 - 3223797 | 32562.2 |
| hypothetical protein | LPB072_RS14735 | Not Available | Negative | 3223869 - 3224180 | 10041.9 |
| atp-binding protein | LPB072_RS14740 | Not Available | Positive | 3224304 - 3225767 | 52172.9 |
| response regulator | LPB072_RS14745 | Not Available | Positive | 3225764 - 3226486 | 27066.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | LPB072_RS14750 | Not Available | Positive | 3226621 - 3227238 | 22462.6 |
| n-acetylmuramoyl-l-alanine amidase | LPB072_RS14755 | Not Available | Positive | 3227235 - 3228674 | 51835.2 |
| yqaa family protein | LPB072_RS14760 | Not Available | Negative | 3228805 - 3229380 | 21401.8 |
| dna mismatch repair endonuclease mutl | LPB072_RS14770 | Not Available | Positive | 3229790 - 3231685 | 68758.1 |
| nadp-specific glutamate dehydrogenase | LPB072_RS14775 | Not Available | Positive | 3231826 - 3233169 | 48015.6 |
| abc transporter permease | LPB072_RS14780 | Not Available | Negative | 3233246 - 3234379 | 41363.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
