Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mlad family protein | LPB072_RS14680 | Not Available | Negative | 3211264 - 3212253 | 34656.7 |
| mlae family abc transporter permease | LPB072_RS14685 | Not Available | Negative | 3212300 - 3213106 | 29988.4 |
| acyl-coa synthetase | LPB072_RS14690 | Not Available | Positive | 3213256 - 3214845 | 57616.3 |
| cap domain-containing protein | LPB072_RS23930 | Not Available | Negative | 3215000 - 3216217 | 42687.8 |
| carboxymuconolactone decarboxylase family protein | LPB072_RS14700 | Not Available | Positive | 3216433 - 3217032 | 21967.2 |
| putative zinc-binding metallopeptidase | LPB072_RS14705 | Not Available | Negative | 3217131 - 3218300 | 44427.2 |
| zinc ribbon domain-containing protein | LPB072_RS14710 | Not Available | Negative | 3218532 - 3219404 | 31046.9 |
| trna epoxyqueuosine(34) reductase queg | LPB072_RS14715 | Not Available | Negative | 3219481 - 3220575 | 39693.3 |
| hupe/urej family protein | LPB072_RS14720 | Not Available | Negative | 3220660 - 3221796 | 40193.6 |
| yhyh protein | LPB072_RS14725 | Not Available | Negative | 3221798 - 3222823 | 35612.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
