Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | LPB072_RS14530 | Not Available | Positive | 3178290 - 3179231 | 32921.0 |
| aldehyde dehydrogenase | LPB072_RS14535 | Not Available | Positive | 3179228 - 3180721 | 52861.3 |
| aldehyde dehydrogenase family protein | LPB072_RS14540 | Not Available | Positive | 3180740 - 3182176 | 51172.0 |
| mandelate racemase/muconate lactonizing enzyme family protein | LPB072_RS14545 | Not Available | Positive | 3182184 - 3183374 | 43878.1 |
| acyl-coa dehydrogenase family protein | LPB072_RS14550 | Not Available | Negative | 3184054 - 3185808 | 64383.8 |
| hypothetical protein | LPB072_RS14555 | Not Available | Negative | 3185863 - 3187266 | 48619.4 |
| barstar family protein | LPB072_RS14560 | Not Available | Negative | 3187280 - 3187926 | 23277.2 |
| 3-oxoacid coa-transferase subunit a | LPB072_RS14565 | Not Available | Negative | 3187923 - 3188597 | 24285.3 |
| trap transporter permease | LPB072_RS14570 | Not Available | Negative | 3188594 - 3190570 | 69420.6 |
| taxi family trap transporter solute-binding subunit | LPB072_RS14575 | Not Available | Negative | 3190796 - 3191926 | 40708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
