Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix protein, copg family | LPB072_RS14480 | Not Available | Negative | 3168977 - 3169183 | 7425.87 |
| hypothetical protein | LPB072_RS14485 | Not Available | Negative | 3169232 - 3169456 | 7997.59 |
| yoak family protein | LPB072_RS14490 | Not Available | Positive | 3169667 - 3170425 | 27257.6 |
| hypothetical protein | LPB072_RS14495 | Not Available | Positive | 3170425 - 3170775 | 13020.4 |
| fused mfs/spermidine synthase | LPB072_RS14500 | Not Available | Positive | 3170820 - 3171590 | 28541.7 |
| sulp family inorganic anion transporter | LPB072_RS14505 | Not Available | Positive | 3171587 - 3173227 | 57521.3 |
| zinc ribbon domain-containing protein yjdm | LPB072_RS14510 | Not Available | Positive | 3173275 - 3173613 | 12064.5 |
| isocitrate/isopropylmalate dehydrogenase family protein | LPB072_RS14515 | Not Available | Positive | 3173690 - 3174721 | 36548.4 |
| plp-dependent aminotransferase family protein | LPB072_RS14520 | Not Available | Negative | 3174865 - 3176259 | 49991.3 |
| gmc family oxidoreductase | LPB072_RS14525 | Not Available | Positive | 3176630 - 3178246 | 58505.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
