Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phox family protein | LPB072_RS14430 | Not Available | Positive | 3152099 - 3154270 | 78037.0 |
| hypothetical protein | LPB072_RS14435 | Not Available | Positive | 3154432 - 3154797 | 13652.5 |
| porin | LPB072_RS14440 | Not Available | Positive | 3155043 - 3156023 | 33938.8 |
| coa transferase | LPB072_RS14445 | Not Available | Negative | 3156195 - 3158708 | 92789.9 |
| bcct family transporter | LPB072_RS14450 | Not Available | Negative | 3158850 - 3160418 | 56578.1 |
| gmc family oxidoreductase | LPB072_RS14455 | Not Available | Negative | 3160529 - 3162208 | 60715.2 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | LPB072_RS14460 | Not Available | Negative | 3162221 - 3163720 | 53248.4 |
| lysr family transcriptional regulator | LPB072_RS14465 | Not Available | Positive | 3163837 - 3164805 | 35681.9 |
| uvrd-helicase domain-containing protein | LPB072_RS14470 | Not Available | Negative | 3164809 - 3167247 | 89737.4 |
| gmp reductase | LPB072_RS14475 | Not Available | Positive | 3167461 - 3168438 | 35410.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
