Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | LPB072_RS14380 | Not Available | Positive | 3135934 - 3138543 | 95519.3 |
| pas domain-containing sensor histidine kinase | LPB072_RS14385 | Not Available | Positive | 3138540 - 3141116 | 94508.5 |
| zip family metal transporter | LPB072_RS14390 | Not Available | Negative | 3141127 - 3141945 | 28878.4 |
| dienelactone hydrolase family protein | LPB072_RS14395 | Not Available | Negative | 3142063 - 3142962 | 31286.4 |
| alkaline phosphatase d family protein | LPB072_RS14400 | Not Available | Positive | 3143139 - 3144695 | 57363.7 |
| dna polymerase i | LPB072_RS14405 | Not Available | Negative | 3144715 - 3147519 | 101763.0 |
| hypothetical protein | LPB072_RS14410 | Not Available | Positive | 3147598 - 3147957 | 12443.6 |
| homoserine kinase | LPB072_RS14415 | Not Available | Positive | 3147964 - 3148974 | 37326.6 |
| bpss1780 family membrane protein | LPB072_RS14420 | Not Available | Positive | 3148987 - 3149766 | 28276.6 |
| phox family protein | LPB072_RS14425 | Not Available | Negative | 3149840 - 3151852 | 70544.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
