Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LPB072_RS14285 | Not Available | Positive | 3115012 - 3116262 | 44162.9 |
| hypothetical protein | LPB072_RS24075 | Not Available | Positive | 3116259 - 3116387 | 4590.69 |
| class i sam-dependent methyltransferase | LPB072_RS14290 | Not Available | Positive | 3116387 - 3116944 | 19998.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | LPB072_RS14295 | Not Available | Positive | 3117016 - 3117906 | 31589.8 |
| outer membrane protein assembly factor bamc | LPB072_RS14300 | Not Available | Positive | 3117942 - 3119075 | 41163.4 |
| hypothetical protein | LPB072_RS14305 | Not Available | Negative | 3119203 - 3119574 | 11493.3 |
| hypothetical protein | LPB072_RS14310 | Not Available | Negative | 3119807 - 3120313 | 19061.6 |
| jmjc domain-containing protein | LPB072_RS14315 | Not Available | Negative | 3120351 - 3121472 | 41906.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | LPB072_RS14320 | Not Available | Positive | 3121550 - 3122098 | 20152.9 |
| dutp diphosphatase | LPB072_RS14325 | Not Available | Negative | 3122139 - 3122588 | 15810.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
