Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | LPB072_RS23925 | Not Available | Positive | 3103416 - 3103688 | 10111.9 |
| crotonase/enoyl-coa hydratase family protein | LPB072_RS14240 | Not Available | Negative | 3103725 - 3104543 | 29636.0 |
| hypothetical protein | LPB072_RS14245 | Not Available | Positive | 3104791 - 3105756 | 34604.3 |
| enoyl-coa hydratase | LPB072_RS14250 | Not Available | Positive | 3105782 - 3106603 | 29278.1 |
| nad(p)h-dependent flavin oxidoreductase | LPB072_RS14255 | Not Available | Positive | 3106648 - 3107625 | 34494.2 |
| cation:proton antiporter | LPB072_RS14260 | Not Available | Negative | 3107747 - 3109009 | 44157.6 |
| duf4189 domain-containing protein | LPB072_RS14265 | Not Available | Negative | 3109149 - 3109544 | 12571.8 |
| dna topoisomerase iv subunit a | LPB072_RS14270 | Not Available | Negative | 3109771 - 3112116 | 84889.9 |
| lytic transglycosylase domain-containing protein | LPB072_RS14275 | Not Available | Negative | 3112141 - 3112875 | 26662.0 |
| dna topoisomerase iv subunit b | LPB072_RS14280 | Not Available | Negative | 3112872 - 3114842 | 71495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
