Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3067150 - 3067225 | Not Available |
| hu family dna-binding protein | LPB072_RS14100 | Not Available | Negative | 3067246 - 3067518 | 9599.8 |
| tartrate dehydrogenase | LPB072_RS14105 | Not Available | Negative | 3067809 - 3068903 | 40005.1 |
| dmt family transporter | LPB072_RS14110 | Not Available | Negative | 3068974 - 3069879 | 32369.6 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | LPB072_RS14115 | Not Available | Negative | 3069886 - 3070455 | 20895.2 |
| duf3592 domain-containing protein | LPB072_RS14120 | Not Available | Negative | 3070545 - 3071021 | 18207.1 |
| excinuclease abc subunit uvrc | LPB072_RS14125 | Not Available | Negative | 3071094 - 3073154 | 75484.5 |
| elongation factor p maturation arginine rhamnosyltransferase earp | LPB072_RS14130 | Not Available | Positive | 3073223 - 3074356 | 42894.1 |
| elongation factor p | LPB072_RS14135 | Not Available | Positive | 3074507 - 3075061 | 20601.9 |
| aec family transporter | LPB072_RS14140 | Not Available | Positive | 3075149 - 3076027 | 30838.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
